Uses of Class
pal.misc.PalObjectEvent
Packages that use PalObjectEvent
Package
Description
Classes for evaluating evolutionary hypothesis (chi-square and likelihood
criteria) and estimating model parameters.
Classes that don't fit elsewhere ;^)
Classes describing substitution models, i.e.
-
Uses of PalObjectEvent in pal.eval
Methods in pal.eval with parameters of type PalObjectEventModifier and TypeMethodDescriptionvoid
FastLikelihoodCalculator.parametersChanged
(PalObjectEvent pe) void
GeneralLikelihoodCalculator.parametersChanged
(PalObjectEvent pe) void
FastLikelihoodCalculator.structureChanged
(PalObjectEvent pe) void
GeneralLikelihoodCalculator.structureChanged
(PalObjectEvent pe) -
Uses of PalObjectEvent in pal.misc
Methods in pal.misc with parameters of type PalObjectEventModifier and TypeMethodDescriptionprotected void
PalObjectListener.EventGenerator.fireParametersChangedEvent
(PalObjectEvent pe) Called by subclasses to fire a specific PalObjectEvent on all listenersprotected void
PalObjectListener.EventGenerator.fireStructureChangedEvent
(PalObjectEvent pe) Called by subclasses to fire a specific PalObjectEvent on all listenersvoid
PalObjectListener.parametersChanged
(PalObjectEvent pe) Signifies that parametric valued governing the state of this Object have changed.void
PalObjectListener.structureChanged
(PalObjectEvent pe) Signifies that the structure of the object has changed (for example in trees to topology has changed) -
Uses of PalObjectEvent in pal.substmodel
Methods in pal.substmodel with parameters of type PalObjectEventModifier and TypeMethodDescriptionprotected void
AbstractRateMatrix.fireParametersChangedEvent
(PalObjectEvent pe) void
CachedRateMatrix.parametersChanged
(PalObjectEvent pe) void
CachedRateMatrix.structureChanged
(PalObjectEvent pe)