Uses of Interface
pal.algorithmics.UndoableAction
Packages that use UndoableAction
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Uses of UndoableAction in pal.algorithmics
Methods in pal.algorithmics that return UndoableActionModifier and TypeMethodDescriptionstatic final UndoableAction
UndoableAction.Utils.getCombined
(UndoableAction[] subActions) Create an action that combines multiple actionsstatic final UndoableAction
UndoableAction.Utils.getDistributedSelection
(UndoableAction[] subActions, double[] actionProportions) Create an action that selects uniformly from a number of sub actionsstatic final UndoableAction
UndoableAction.Utils.getSimpleDesparation
(UndoableAction primaryAction, UndoableAction desparateAction, double desparationLimit, int desparationInterval) A simple tool for change actions when things get desparatestatic final UndoableAction
UndoableAction.Utils.getSimpleUniformSelection
(UndoableAction[] subActions) Create an action that selects uniformly from a number of sub actionsMethods in pal.algorithmics with parameters of type UndoableActionModifier and TypeMethodDescriptionstatic final UndoableAction
UndoableAction.Utils.getCombined
(UndoableAction[] subActions) Create an action that combines multiple actionsstatic final UndoableAction
UndoableAction.Utils.getDistributedSelection
(UndoableAction[] subActions, double[] actionProportions) Create an action that selects uniformly from a number of sub actionsstatic final UndoableAction
UndoableAction.Utils.getSimpleDesparation
(UndoableAction primaryAction, UndoableAction desparateAction, double desparationLimit, int desparationInterval) A simple tool for change actions when things get desparatestatic final UndoableAction
UndoableAction.Utils.getSimpleUniformSelection
(UndoableAction[] subActions) Create an action that selects uniformly from a number of sub actionsConstructors in pal.algorithmics with parameters of type UndoableActionModifierConstructorDescriptionGeneralObjectState
(UndoableAction action, StateProvider subject, boolean maximise) -
Uses of UndoableAction in pal.treesearch
Methods in pal.treesearch that return UndoableActionModifier and TypeMethodDescriptionUnrootedMLSearcher.getBranchLengthOptimiseAction
(StoppingCriteria.Factory stopper) UnrootedMLSearcher.getBranchLengthWithModelOptimiseAction
(StoppingCriteria.Factory stopper, MultivariateMinimum minimiser, int fxFracDigits, int xFracDigits) UnrootedMLSearcher.getFullSweepSPRAction
(StoppingCriteria.Factory stopper) UnrootedMLSearcher.getModelOptimiseAction
(MultivariateMinimum minimiser, int fxFracDigits, int xFracDigits) UnrootedMLSearcher.getModelOptimiseAction
(MultivariateMinimum minimiser, MinimiserMonitor monitor, int fxFracDigits, int xFracDigits) UnrootedMLSearcher.getNNIAction
(StoppingCriteria.Factory stopper) UnrootedMLSearcher.getNNIBranchLengthOptimiseAction
(StoppingCriteria.Factory stopper) UnrootedMLSearcher.getSPRAction
(StoppingCriteria.Factory stopper) UnrootedMLSearcher.getSweepSPRAction
(StoppingCriteria.Factory stopper)