libpappsomspp
Library for mass spectrometry
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filterinterface.h
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1/**
2 * \file pappsomspp/processing/filers/filterinterface.h
3 * \date 26/04/2019
4 * \author Olivier Langella
5 * \brief generic interface to filter any trace
6 */
7
8/*******************************************************************************
9 * Copyright (c) 2019 Olivier Langella <Olivier.Langella@u-psud.fr>.
10 *
11 * This file is part of the PAPPSOms++ library.
12 *
13 * PAPPSOms++ is free software: you can redistribute it and/or modify
14 * it under the terms of the GNU General Public License as published by
15 * the Free Software Foundation, either version 3 of the License, or
16 * (at your option) any later version.
17 *
18 * PAPPSOms++ is distributed in the hope that it will be useful,
19 * but WITHOUT ANY WARRANTY; without even the implied warranty of
20 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
21 * GNU General Public License for more details.
22 *
23 * You should have received a copy of the GNU General Public License
24 * along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
25 *
26 ******************************************************************************/
27
28#pragma once
29#include <memory>
31
32
33namespace pappso
34{
35class Trace;
36
37/** @brief generic interface to apply a filter on a trace
38 */
40{
41 public:
42 virtual Trace &filter(Trace &data_points) const = 0;
43 virtual ~FilterInterface(){};
44};
45
46typedef std::shared_ptr<FilterInterface> FilterInterfaceSPtr;
47typedef std::shared_ptr<const FilterInterface> FilterInterfaceCstSPtr;
48
49class MassSpectrum;
50/** @brief generic interface to apply a filter on a MassSpectrum
51 * This is the same as FilterInterface, but some filter are only relevant if
52 * they are used on MassSpectrum using this interface means the filter can only
53 * be applied on MassSpectrum and not on Trace
54 */
56{
57 public:
58 virtual MassSpectrum &filter(MassSpectrum &spectrum) const = 0;
59
61};
62
63
64} // namespace pappso
generic interface to apply a filter on a trace
virtual Trace & filter(Trace &data_points) const =0
generic interface to apply a filter on a MassSpectrum This is the same as FilterInterface,...
virtual MassSpectrum & filter(MassSpectrum &spectrum) const =0
Class to represent a mass spectrum.
A simple container of DataPoint instances.
Definition trace.h:148
#define PMSPP_LIB_DECL
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition aa.cpp:39
std::shared_ptr< FilterInterface > FilterInterfaceSPtr
std::shared_ptr< const FilterInterface > FilterInterfaceCstSPtr