libpappsomspp
Library for mass spectrometry
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fastahandlerinterface.h
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1
2/*******************************************************************************
3 * Copyright (c) 2015 Olivier Langella <Olivier.Langella@moulon.inra.fr>.
4 *
5 * This file is part of the PAPPSOms++ library.
6 *
7 * PAPPSOms++ is free software: you can redistribute it and/or modify
8 * it under the terms of the GNU General Public License as published by
9 * the Free Software Foundation, either version 3 of the License, or
10 * (at your option) any later version.
11 *
12 * PAPPSOms++ is distributed in the hope that it will be useful,
13 * but WITHOUT ANY WARRANTY; without even the implied warranty of
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
15 * GNU General Public License for more details.
16 *
17 * You should have received a copy of the GNU General Public License
18 * along with PAPPSOms++. If not, see <http://www.gnu.org/licenses/>.
19 *
20 * Contributors:
21 * Olivier Langella <Olivier.Langella@moulon.inra.fr> - initial API and
22 *implementation
23 ******************************************************************************/
24
25#pragma once
26#include <QString>
28
29namespace pappso
30{
32{
33 public:
34 virtual void setSequence(const QString &description,
35 const QString &sequence) = 0;
36};
37
38
40{
41 public:
42 const QString &
44 {
45 return description;
46 };
47 const QString &
49 {
50 return sequence;
51 };
52 void
53 setSequence(const QString &description_in,
54 const QString &sequence_in) override
55 {
56 description = description_in;
57 sequence = sequence_in;
58 };
59
60 private:
61 QString description;
62 QString sequence;
63};
64} // namespace pappso
virtual void setSequence(const QString &description, const QString &sequence)=0
const QString & getSequence() const
void setSequence(const QString &description_in, const QString &sequence_in) override
const QString & getDescription() const
tries to keep as much as possible monoisotopes, removing any possible C13 peaks and changes multichar...
Definition aa.cpp:39