Nearest Neighbor Detection for Bioconductor Packages


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Documentation for package ‘BiocNeighbors’ version 2.0.1

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BiocNeighbors-package BiocNeighbors: Nearest Neighbor Detection for Bioconductor Packages
AnnoyIndex The AnnoyParam class
AnnoyIndex-class The AnnoyParam class
AnnoyParam The AnnoyParam class
AnnoyParam-class The AnnoyParam class
BiocNeighborGenericIndex-class The BiocNeighborIndex class
BiocNeighborIndex The BiocNeighborIndex class
BiocNeighborIndex-class The BiocNeighborIndex class
BiocNeighborParam The BiocNeighborParam class
BiocNeighborParam-class The BiocNeighborParam class
BiocNeighbors BiocNeighbors: Nearest Neighbor Detection for Bioconductor Packages
bndistance The BiocNeighborParam class
buildIndex Build a nearest-neighbor index
buildIndex-method Build a nearest-neighbor index
defineBuilder Define an index builder
defineBuilder-method The AnnoyParam class
defineBuilder-method The ExhaustiveParam class
defineBuilder-method The HnswParam class
defineBuilder-method The KmknnParam class
defineBuilder-method The VptreeParam class
defineBuilder-method Define an index builder
ExhaustiveIndex The ExhaustiveParam class
ExhaustiveIndex-class The ExhaustiveParam class
ExhaustiveParam The ExhaustiveParam class
ExhaustiveParam-class The ExhaustiveParam class
findDistance Distance to the k-th nearest neighbor
findDistance-method Distance to the k-th nearest neighbor
findKNN Find k-nearest neighbors
findKNN-method Find k-nearest neighbors
findMutualNN Find mutual nearest neighbors
findNeighbors Find neighbors within a threshold distance
findNeighbors-method Find neighbors within a threshold distance
HnswIndex The HnswParam class
HnswIndex-class The HnswParam class
HnswParam The HnswParam class
HnswParam-class The HnswParam class
KmknnIndex The KmknnParam class
KmknnIndex-class The KmknnParam class
KmknnParam The KmknnParam class
KmknnParam-class The KmknnParam class
queryDistance Distance to the k-th nearest neighbor to query points
queryDistance-method Distance to the k-th nearest neighbor to query points
queryKNN Query k-nearest neighbors
queryKNN-method Query k-nearest neighbors
queryNeighbors Query neighbors within a threshold distance
queryNeighbors-method Query neighbors within a threshold distance
show-method The AnnoyParam class
show-method The BiocNeighborIndex class
show-method The BiocNeighborParam class
show-method The HnswParam class
VptreeIndex The VptreeParam class
VptreeIndex-class The VptreeParam class
VptreeParam The VptreeParam class
VptreeParam-class The VptreeParam class
[[-method The BiocNeighborParam class
[[<--method The BiocNeighborParam class