Generate plots of PSI values generated by vast-tools

Documentation for package ‘psiplot’ version 2.3.0

psiplot-package	Produce PSI and GE plots based on output from vast-tools
betaCI	Obtain CIs from the sampled values
config	Sample psiplot configuration settings for datasets 'psi' and 'crpkm'
convert_psi	Convert low/bad quality PSI values to NA
crpkm	Sample genes with cRPKM data
crpkm_counts	Sample genes with cRPKM and counts data
draw_group_means	Draw group means as horizontal lines
format_table	Format input event data
get_beta_ci	Calculate confidence intervals for error bars
get_beta_ci_subg	Calculate conficence intervals for error bars of subgrouped samples.
get_psi_samples	Get samples from PSI input table
gg_color_hue	Simulate default ggplot2 color palette
make_title	Make plot title
make_title.2	Make plot title (version 2)
plot_event	Plot PSI values of a given alternative splicing event
plot_expr	Plot cRPKM values of a given gene
plot_multi	Plot multiple events or genes as a heatmap (experimental)
plot_multievent	Plot PSI values of multiple alternative splicing events
preprocess_sample_colors	Preprocess PSI or cRPKM data frame using configuration file
psi	Sample events with PSI data
psiplot	Produce PSI and GE plots based on output from vast-tools